Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015945414.1_cds_XP_016487936.1_78621
CDS Infomation

[gene=LOC107807972] [db_xref=GeneID:107807972] [protein=cysteine-rich receptor-like protein kinase 42] [protein_id=XP_016487936.1] [location=complement(join(10271..10669,10856..11000,11188..11422,11514..11864,11972..12091,12552..13329))] [gbkey=CDS]
Sequence

ATGCATTTTCCACCAAGATACCTTGAACATGTCACGTTCATCTCCTTAATTTTCTTCATT
TTTCTGTTTTCTCCTTGTCTTTGTGATCCAAGAACTTCTGTTGCTAATATTTCTTGTAAA
CCTCGTACAAATGTGTCAATTAACAGCGATTTATTCCCAAAATACATGGAAATCATGGGA
ACTCTCAATGATTTCATTTCGGAAAATAAGTCAGCAACATATTCCGTGAGCTCTACTTCA
CCTGATATTTATGGATTAGCGAAATGCCATAACGATCTTTCTCAGGACGAATGCAAACTT
TGTTTCGTCGAAGCTAAGGATAAGCTCAACACATGCATTCCTGCACCTGGTGGCTCTGTT
TATCTAGACGGTTGTTTTCTCAGATATGAAAATTATGATTTTTTCGACGAGAGCGTGCAG
AAGAATTCTTCTAGTTTTGTTTGTGGTGTTCCGACGGATATAACGAATGATCAGTATATG
AAAAGGGATTTTGCAGCAAGAGTGGATCGTGCAATTGCGAATGTCACAAGCATGTCTATA
GTAAATAAAGGATTTGGGGCAACGATTGTGAAAAGCGGGCTGCTTGCTGTTTATGCATTA
GGCCAATGTTGGGATTCATTGGACGTGGAAATATGTACTAAGTGCCTGAATAATGCTGGA
GATATGATAAGAAAATGTTTGCCTGCTGCAGAAGGAAAAGCTATGAATGCTGGTTGCTAT
TTGAGATACTCTTCTAATAAATTCTTCGGTGATGGAGCACTAGTCCTTGCTGATAAAGGA
CCAACGAAGCGTAAGAATATGTGGATAATTGCAGCGATTGTATTATTGACTATCCTGGGA
ATATTTGCTATTTTAGGAGCTTTTTTAGGCTATAGAAGATATTCTAAGGAGCAAGGAGGT
ACAAAGAGGGTTCATAAGATTCCACGGGCTCTTGAGACATCGAAACTAAATTTCAAGTAC
GAAATGTTAGAAAAAGCAACAGGCGGTTTTGATCCGTTAAACAAGTTGGGCCAAGGGGGA
TCAGGTTCAGTATATAAAGGGATTCTTCCTGATGGAAAAACTGTTGCTGTAAAAAGATTA
TTGTACAATACGCGCCAATGGGCAGAGGAATTCTTTAACGAGGTCAATTTGATCAGTGGT
ATTCAACACAAGAATGTTGTGAAACTCTTGGGTTGTAGCATAGAAGGACCAGAGAGTCTT
CTGGTTTTTGATTTTGTATCTAACAAGAACCTTGATCAAGTGCTTTTTGATAAGAACAAA
CGTCAATTTTTGAGCTGGACGGAGAGGTTTCAAGTCATATTGGGAATAGCAGAAGGGCTT
GCTTATCTGCATGAAGGAAACAAAGCAAAGATAATCCATAGAGATATTAAAAACAGTAAT
ATTTTGGTCGATGAACTACTCATCCCAAAAATTGCTGATTTTGGACTTGCTCGACGTTTT
GCTCCCCATAAAACTCATGTCAGTACTGGAGTTGCAGGAACCTTGGGATACCTAGCTCCT
GAATATCTTCTTCAAGGATGTTTAACAGAGAAAGCAGATGTTTATTCCTTTGGCGTGGTG
GCTATAGAGGTCGCGTGTTGTATAAAGAACAATGTCTTTGTGAGTGATTCCGGATCAGTT
CTACAATCTGTGTGGAGAAACTACAAGTTGAATAAGATTACTGAGTCCATCGACAGCAGG
CTGATGAGTGATTTTCAAGAACAGGAGGCATCACGCGTGCTTCAACTAGGGCTATTGTGT
ACACAAACCAGAAGATTTTCGCGACCATCTATGTCTCAAGTGGTAAGAATCCTAAGAGAC
AAAGAAACTGAAGTTCCGGTGCCTATGCAACCTCCATTCCAAAACTCAAGTTTACTAGCC
CCTCCAGATACAACAAGTAGGTCTTCATTAACTAAAGATAGTTTGTGCTCAGAATGGTAT
TCTACTGATGCAATGTCTATTCATTCCTCTGAGTTTGCTAGTCTATCTAGCTCTCAATCA
AGTGATTTTTCGACGAGTGAAAGCAGTACACTTCTGAAAATACCTTGA

Peptide Sequence

PEP ID

XP_016487936.1
PEP Infomation

PREDICTED: cysteine-rich receptor-like protein kinase 42 [Nicotiana tabacum]
Sequence

MHFPPRYLEHVTFISLIFFIFLFSPCLCDPRTSVANISCKPRTNVSINSDLFPKYMEIMG
TLNDFISENKSATYSVSSTSPDIYGLAKCHNDLSQDECKLCFVEAKDKLNTCIPAPGGSV
YLDGCFLRYENYDFFDESVQKNSSSFVCGVPTDITNDQYMKRDFAARVDRAIANVTSMSI
VNKGFGATIVKSGLLAVYALGQCWDSLDVEICTKCLNNAGDMIRKCLPAAEGKAMNAGCY
LRYSSNKFFGDGALVLADKGPTKRKNMWIIAAIVLLTILGIFAILGAFLGYRRYSKEQGG
TKRVHKIPRALETSKLNFKYEMLEKATGGFDPLNKLGQGGSGSVYKGILPDGKTVAVKRL
LYNTRQWAEEFFNEVNLISGIQHKNVVKLLGCSIEGPESLLVFDFVSNKNLDQVLFDKNK
RQFLSWTERFQVILGIAEGLAYLHEGNKAKIIHRDIKNSNILVDELLIPKIADFGLARRF
APHKTHVSTGVAGTLGYLAPEYLLQGCLTEKADVYSFGVVAIEVACCIKNNVFVSDSGSV
LQSVWRNYKLNKITESIDSRLMSDFQEQEASRVLQLGLLCTQTRRFSRPSMSQVVRILRD
KETEVPVPMQPPFQNSSLLAPPDTTSRSSLTKDSLCSEWYSTDAMSIHSSEFASLSSSQS
SDFSTSESSTLLKIP

Transcript Sequence

Gene sequence data has not been registered.